Troubleshooting

What Happens to Bookmarks When You Split a PDF?

Those navigation bookmarks you rely on? They might disappear when you split. Here's what to expect and how to handle it.

Bony Gonzalves
Bony Gonzalves
Content Writer
February 12, 2024
4 min
What Happens to Bookmarks When You Split a PDF?

You've got a PDF with perfect bookmarks. Every chapter, every section, every important page is bookmarked. Navigation is a breeze. Then you split the PDF, and... the bookmarks are gone. Or they're broken. Or they point to the wrong pages.

This is one of those frustrating things that happens when you split PDFs. The bookmarks you relied on disappear, and suddenly navigation is a nightmare. Let me explain what happens and what you can do about it.

Why Bookmarks Disappear

Bookmarks in PDFs are essentially links to specific pages. When you split a PDF, those links can break for several reasons:

Page numbers change. If you split a PDF, the page numbers in the split files start from 1 again. But bookmarks might still reference the original page numbers from the full document.

Bookmarks reference removed pages. If a bookmark points to a page that's now in a different split file, that bookmark might disappear or break.

Tool limitations. Not all splitting tools handle bookmarks well. Some preserve them, some don't, some try but mess it up.

Bookmark structure gets lost. PDFs can have complex bookmark hierarchies. When you split, that structure might not transfer correctly.

What Actually Happens (It Depends)

The truth is, what happens to bookmarks depends on:

Which tool you use. Some tools are better at preserving bookmarks than others. Adobe Acrobat usually does well. Online tools vary widely.

How you split. Splitting at specific pages might preserve bookmarks better than other methods.

The bookmark structure. Simple bookmarks (just page links) usually transfer better than complex hierarchies.

Where you split. If you split at chapter boundaries that match bookmark locations, bookmarks are more likely to be preserved.

What to Expect

Here's what you can realistically expect:

Best case: Bookmarks are preserved in each split file, adjusted to the new page numbers. This is ideal but not always possible.

Good case: Bookmarks are preserved but point to wrong pages. You can fix them manually, but it's tedious.

Bad case: Bookmarks disappear entirely. You'll need to recreate them.

Worst case: Bookmarks are broken and cause errors when you try to use them.

Most of the time, you'll end up somewhere between "good case" and "bad case." Bookmarks might be partially preserved, or they might disappear entirely.

How to Preserve Bookmarks

If bookmarks are important to you, here's how to maximize your chances of keeping them:

Use our Split PDF tool. Our Split PDF tool works well for splitting PDFs by page ranges. While bookmarks may not always transfer perfectly, splitting at logical boundaries (like chapter breaks) gives you the best results.

Split at bookmark locations. If your PDF has bookmarks at chapter boundaries, use our Split PDF tool to split at those same boundaries. This approach works best for preserving document structure.

Test with a small sample first. Before splitting your entire PDF, try splitting a small section and see what happens to bookmarks. This tells you what to expect.

Check tool documentation. Some tools specifically mention how they handle bookmarks. Check before you split.

Keep the original. Always keep the original PDF with intact bookmarks. You might need to reference it or recreate bookmarks.

Recreating Bookmarks After Splitting

If bookmarks disappear, you can recreate them. It's not fun, but it's doable:

Use a PDF editor. Most PDF editors let you add bookmarks manually. It's tedious but works.

Use the table of contents. If your PDF has a table of contents, use it as a guide for where to place bookmarks.

Create bookmarks as you need them. You don't need to bookmark everything at once. Add bookmarks as you discover you need them.

Use consistent naming. When recreating bookmarks, use a consistent naming scheme. It makes navigation easier.

Alternatives to Bookmarks

If bookmarks are causing problems, consider alternatives:

Use the table of contents. Many PDFs have a TOC that works even after splitting. It's not as convenient as bookmarks, but it works.

Use search. If you know what you're looking for, search can be faster than navigating bookmarks.

Create a navigation document. A simple text file or separate PDF listing chapter titles and page numbers can serve as navigation.

Use page numbers. If you know the page number you need, you can jump directly to it.

When Bookmarks Matter Most

Bookmarks are most important when:

The PDF is very long. In a 500-page document, bookmarks are essential for navigation.

You reference specific sections often. If you're constantly jumping to the same sections, bookmarks save time.

The PDF has complex structure. Documents with many sections, subsections, and cross-references benefit from bookmarks.

You're sharing the PDF. Recipients will appreciate good bookmark navigation.

If your PDF is short (under 50 pages) or you rarely need to jump around, missing bookmarks might not be a big deal.

Tools That Handle Bookmarks Well

Based on my experience, these tools usually preserve bookmarks:

Adobe Acrobat: The gold standard. Usually preserves bookmarks correctly when splitting.

PDF Expert (Mac): Excellent bookmark handling. Usually preserves them well.

PDFtk: Command-line tool that's very reliable with bookmarks, but requires technical knowledge.

Our Split PDF tool: Our Split PDF tool works in your browser and keeps your files private. While bookmarks may not always transfer perfectly, our tool makes splitting easy and reliable. For most use cases, you can recreate the bookmarks you actually need after splitting.

The key is using a tool that makes splitting easy and reliable. Our tool handles the splitting process well, and you can add bookmarks back if needed.

Best Practices

Here's my workflow when bookmarks matter:

  1. **Check bookmarks in original.** Before splitting, note what bookmarks exist and where they point.
  1. **Choose the right tool.** Use a tool known for handling bookmarks well.
  1. **Split carefully.** Split at logical boundaries that match bookmark locations if possible.
  1. **Test first.** Split a small section and check what happens to bookmarks.
  1. **Verify after splitting.** Open each split file and check if bookmarks are preserved.
  1. **Recreate if needed.** If bookmarks are lost, recreate them using the original as a guide.
  1. **Keep the original.** Never delete the original PDF until you're sure everything is correct.

Don't Let Bookmarks Stop You

Here's what I've learned after dealing with bookmark issues on dozens of split PDFs: bookmarks breaking isn't a reason to avoid splitting. It's just something to plan for.

The reality is that most people can work around missing bookmarks. If your PDF is under 100 pages, you probably don't need bookmarks anyway—just scroll or use search. If it's longer, you can recreate the important bookmarks, or use the table of contents, or create a simple navigation document.

The key is not letting perfect be the enemy of good. Yes, it would be nice if bookmarks always transferred perfectly. But if splitting your PDF makes it more usable, and the only downside is losing bookmarks, that's usually a trade-off worth making.

I've seen people spend hours trying to preserve bookmarks when they could have just split the PDF and recreated the three or four bookmarks they actually use. Don't be that person. Split the PDF, see if you miss the bookmarks, and only then decide if you need to recreate them.

Most of the time, you'll find that the split files are so much easier to work with that you don't even notice the missing bookmarks. And if you do need them, recreating them takes 10 minutes, not hours.

Ready to split your PDF? Try our Split PDF tool now. Upload your PDF, choose your page ranges, and download your split files. Our tool makes splitting simple and reliable. If bookmarks are important, you can recreate them after splitting. It's free, works in your browser, and keeps your files private.

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